In the job configuration we can provide expected limits:

For example:

Coverage Metric Targets:	Classes			80%		50%
	Lines			80%		50%
	[ADD]

So the idea is to select metric with minimal value and highlight in the report table whole row which does not satisfy some condition,
for example below:

(meaning values in bold)
There would be red highlight for mod.submodule1 and mod.submodule3 and orange for mod.submodule2

So rows would looks like: (unfortunately jira does not allow to have colored table)